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Basically you're thinking these two things are related, they are, but not....
Testing the compression is just to make sure the cylinder is properly sealed an does in fact compress the air/fuel...rather than blow-by. Like if you have a bent valve, your compression in that cylinder will be really low cause upon trying to compress the cylinder all the air blows through the hole on the valve. This has nothing to do with FI vs. NA, as in both setups you want the engine to hold compression!
Compression ratio refers to the volume of the combustion chamber at full compression versus volume when the piston is at the bottom iof it's stroke. You measure that by knowing the volume of the combustion chamber, the displacement of the engine, and the volume displaced bu the dome or indent of the piston.
Think of a high compression engine, that means the piston is usually has very obvious raised spots on it, that reduce the size of the combustion chamber at full compression. This is bad for FI because with a turbo you are trying to ram a ton more air in there, and the higher the compression, the less space you have to jam it in. Too much air and not enough fuel and not the right timing and the mixture could pre ignite and BAM buh bye engine...
So general people lower the compression to leave more room for the air, and a greater margin for tuning...
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