The easiest swap for you would be a Japanese "Type-S" model engine. Or the USDM SH motor. They will bolt right up and be no issue. However, they don't come cheap, especially the Type-S motors, which usually sell for around $3k at most importing places.
I don't think the base block will work correctly with your trans even if you remove the ATTS. There are different axles used, for one thing. Then there is an actual bracket that is mounted on the block on Base model engine blocks, but is not needed on SH blocks because the ATTS serves as that bracket.
So, you'd have to add that bracket.
I
think I got that right, can somebody correct me?